fastx_toolkit-0.0.14-34.fc40 RPM for aarch64

From Fedora Rawhide for aarch64 / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(aarch-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• ld-linux-aarch64.so.1()(64bit)
• ld-linux-aarch64.so.1(GLIBC_2.17)(64bit)
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.17)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPLv3+

Changelog

* Wed Jan 24 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-34
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Fri Jan 19 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-33
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-32
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-31
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/01
/usr/lib/.build-id/01/c557aa72735c2a25294c401b0a62dc011a175f
/usr/lib/.build-id/1a
/usr/lib/.build-id/1a/9939c2832751dba8999ab5ad1e3b5c4f39eeb6
/usr/lib/.build-id/1e
/usr/lib/.build-id/1e/076271984e2507681ea49b909027f10f52f903
/usr/lib/.build-id/33
/usr/lib/.build-id/33/c13f24841c044cda0262a881acf36090ccb5b5
/usr/lib/.build-id/38
/usr/lib/.build-id/38/f9ed468be310a0dd7127f265174ae7ca3d23e6
/usr/lib/.build-id/39
/usr/lib/.build-id/39/3b25673214798381600ac10d168885007daf90
/usr/lib/.build-id/69
/usr/lib/.build-id/69/d4627f980ed899ee24cf47d5ba72fd1d6a4c6a
/usr/lib/.build-id/71
/usr/lib/.build-id/71/b602db806551c5847f4efc0fe9328c1ca6ce58
/usr/lib/.build-id/93
/usr/lib/.build-id/93/efec99608347c032e378c079ad1aa3acc26ce7
/usr/lib/.build-id/99
/usr/lib/.build-id/99/c5e96ab11c2dba824e81aefc93e9e121d9adac
/usr/lib/.build-id/a8
/usr/lib/.build-id/a8/faf0cd6212b738c25652587eb7fdfbd51249bd
/usr/lib/.build-id/b1
/usr/lib/.build-id/b1/ac207e5c3ed9a6ef3f69109a310aced5910e19
/usr/lib/.build-id/c5
/usr/lib/.build-id/c5/8be5507417d15aff2f77917d8daf612015471f
/usr/lib/.build-id/d2
/usr/lib/.build-id/d2/4e67a795c2305c2cb7f7c061de65ff54f2bf43
/usr/lib/.build-id/f6
/usr/lib/.build-id/f6/e75654ca76e8f43ce30ca9e46e66cd9efee0db
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Mon May 6 00:14:17 2024