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Name: bowtie | Distribution: Fedora Project |
Version: 1.3.1 | Vendor: Fedora Project |
Release: 1.fc38 | Build date: Tue Feb 21 15:23:02 2023 |
Group: Unspecified | Build host: buildvm-a64-20.iad2.fedoraproject.org |
Size: 19122610 | Source RPM: bowtie-1.3.1-1.fc38.src.rpm |
Packager: Fedora Project | |
Url: http://bowtie-bio.sourceforge.net/index.shtml | |
Summary: An ultrafast, memory-efficient short read aligner |
Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.
Artistic 2.0 and zlib
* Fri Feb 17 2023 Jun Aruga <jaruga@redhat.com> - 1.3.1-1 - Update to upstream release 1.3.1 Resolves: rhbz#2003918 * Wed Jan 18 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.0-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild * Wed Jul 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.0-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild * Wed Jan 19 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild * Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
/usr/bin/bowtie /usr/bin/bowtie-align-l /usr/bin/bowtie-align-l-debug /usr/bin/bowtie-align-s /usr/bin/bowtie-align-s-debug /usr/bin/bowtie-build /usr/bin/bowtie-build-l /usr/bin/bowtie-build-l-debug /usr/bin/bowtie-build-s /usr/bin/bowtie-build-s-debug /usr/bin/bowtie-inspect /usr/bin/bowtie-inspect-l /usr/bin/bowtie-inspect-l-debug /usr/bin/bowtie-inspect-s /usr/bin/bowtie-inspect-s-debug /usr/lib/.build-id /usr/lib/.build-id/17 /usr/lib/.build-id/17/2253c65cac183e290b68e8c845d6d659044a5a /usr/lib/.build-id/25 /usr/lib/.build-id/25/dc8251bd53920e9c69e68b4c03dad0d88546ec /usr/lib/.build-id/44 /usr/lib/.build-id/44/04c10e3a9e5b7c4a22cbfe2bc35904c8607ad9 /usr/lib/.build-id/46 /usr/lib/.build-id/46/0b4b75e72c317aa16d8ee6948d9f54b3b90fa0 /usr/lib/.build-id/4c /usr/lib/.build-id/4c/921a068cd098345e12785818d2276b17998266 /usr/lib/.build-id/55 /usr/lib/.build-id/55/f4cce2ae8a624883e6cad09eb2cf16f4708d6d /usr/lib/.build-id/7a /usr/lib/.build-id/7a/100e0e03c3c44baf2205c51f6a67f71ded2313 /usr/lib/.build-id/98 /usr/lib/.build-id/98/2655e7c09a7456fe0ac3a2b8b3d3b5cb817ef6 /usr/lib/.build-id/c4 /usr/lib/.build-id/c4/e8439a135e3485888e32548052159f818de9db /usr/lib/.build-id/db /usr/lib/.build-id/db/bd40fad957ce51bf72dac89a57b5f779debefe /usr/lib/.build-id/e7 /usr/lib/.build-id/e7/5584ebe1133624a1b1c554844463fb5686ed30 /usr/lib/.build-id/f0 /usr/lib/.build-id/f0/58eb37007d81ba29485053e78f29ae930d8ea8 /usr/share/bowtie /usr/share/bowtie/genomes /usr/share/bowtie/genomes/NC_008253.fna /usr/share/bowtie/indexes /usr/share/bowtie/indexes/e_coli.1.ebwt /usr/share/bowtie/indexes/e_coli.2.ebwt /usr/share/bowtie/indexes/e_coli.3.ebwt /usr/share/bowtie/indexes/e_coli.4.ebwt /usr/share/bowtie/indexes/e_coli.README /usr/share/bowtie/indexes/e_coli.rev.1.ebwt /usr/share/bowtie/indexes/e_coli.rev.2.ebwt /usr/share/bowtie/reads /usr/share/bowtie/reads/e_coli_1000.fa /usr/share/bowtie/reads/e_coli_1000.fq /usr/share/bowtie/reads/e_coli_1000.raw /usr/share/bowtie/reads/e_coli_10000snp.fa /usr/share/bowtie/reads/e_coli_10000snp.fq /usr/share/bowtie/reads/e_coli_1000_1.fa /usr/share/bowtie/reads/e_coli_1000_1.fq /usr/share/bowtie/reads/e_coli_1000_2.fa /usr/share/bowtie/reads/e_coli_1000_2.fq /usr/share/bowtie/reads/e_coli_1000_interleaved.fq /usr/share/bowtie/scripts /usr/share/bowtie/scripts/best_verify.pl /usr/share/bowtie/scripts/bowtie-hbb.sh /usr/share/bowtie/scripts/bs_mapability.pl /usr/share/bowtie/scripts/build_test.sh /usr/share/bowtie/scripts/colorize_fasta.pl /usr/share/bowtie/scripts/colorize_fastq.pl /usr/share/bowtie/scripts/convert_quals.pl /usr/share/bowtie/scripts/fastq_to_tabbed.pl /usr/share/bowtie/scripts/gen_2b_occ_lookup.pl /usr/share/bowtie/scripts/gen_dnamasks2colormask.pl /usr/share/bowtie/scripts/gen_occ_lookup.pl /usr/share/bowtie/scripts/gen_solqual_lookup.pl /usr/share/bowtie/scripts/infer_fraglen.pl /usr/share/bowtie/scripts/make_a_thaliana_tair.sh /usr/share/bowtie/scripts/make_b_taurus_UMD3.sh /usr/share/bowtie/scripts/make_c_elegans.sh /usr/share/bowtie/scripts/make_canFam2.sh /usr/share/bowtie/scripts/make_d_melanogaster.sh /usr/share/bowtie/scripts/make_e_coli.sh /usr/share/bowtie/scripts/make_galGal3.sh /usr/share/bowtie/scripts/make_h_sapiens_ncbi36.sh /usr/share/bowtie/scripts/make_h_sapiens_ncbi37.sh /usr/share/bowtie/scripts/make_hg18.sh /usr/share/bowtie/scripts/make_hg19.sh /usr/share/bowtie/scripts/make_m_musculus_ncbi37.sh /usr/share/bowtie/scripts/make_mm8.sh /usr/share/bowtie/scripts/make_mm9.sh /usr/share/bowtie/scripts/make_rn4.sh /usr/share/bowtie/scripts/make_s_cerevisiae.sh /usr/share/bowtie/scripts/mapability.pl /usr/share/bowtie/scripts/pe_verify.pl /usr/share/bowtie/scripts/reconcile_alignments.pl /usr/share/bowtie/scripts/reconcile_alignments_pe.pl /usr/share/bowtie/scripts/run-hbb.sh /usr/share/doc/bowtie /usr/share/doc/bowtie/AUTHORS /usr/share/doc/bowtie/MANUAL /usr/share/doc/bowtie/NEWS /usr/share/doc/bowtie/TUTORIAL /usr/share/doc/bowtie/VERSION /usr/share/doc/bowtie/manual.html /usr/share/doc/bowtie/style.css /usr/share/licenses/bowtie /usr/share/licenses/bowtie/LICENSE
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Fabrice Bellet, Thu May 9 22:19:29 2024