bowtie-1.3.0-3.fc35 RPM for x86_64

From Fedora 37 for x86_64 / b

Bowtie, an ultrafast, memory-efficient short read aligner for short
DNA sequences (reads) from next-gen sequencers. Please cite: Langmead
B, et al. Ultrafast and memory-efficient alignment of short DNA
sequences to the human genome. Genome Biol 10:R25.

Provides

• bowtie
• bowtie(x86-64)
• bundled(tiny-thread)

Requires

• /usr/bin/bash
• /usr/bin/perl
• /usr/bin/python3
• /usr/bin/sh
• glibc >= 2.33.9000-43.fc35
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.14)(64bit)
• libc.so.6(GLIBC_2.2.5)(64bit)
• libc.so.6(GLIBC_2.32)(64bit)
• libc.so.6(GLIBC_2.33)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.2.5)(64bit)
• libm.so.6(GLIBC_2.27)(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.2)(64bit)
• libstdc++.so.6(CXXABI_1.3.8)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.22)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.26)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• libz.so.1()(64bit)
• libz.so.1(ZLIB_1.2.0.2)(64bit)
• libz.so.1(ZLIB_1.2.3.3)(64bit)
• libz.so.1(ZLIB_1.2.3.5)(64bit)
• python3
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1

License

Artistic 2.0 and zlib

Changelog

* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.0-3
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.0-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Tue Jul 28 2020 Jun Aruga <jaruga@redhat.com> - 1.3.0-1
  - Update to upstream release 1.3.0
* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.2.3-3
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Tue Mar 17 2020 Jun Aruga <jaruga@redhat.com> - 1.2.3-2
  - Fix the build failure adding perl(FindBin) and perl(lib) build dependencies.
* Fri Feb 28 2020 Jun Aruga <jaruga@redhat.com> - 1.2.3-1
  - Update to upstream release 1.2.3
* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-14
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-13
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild

Files

/usr/bin/bowtie
/usr/bin/bowtie-align-l
/usr/bin/bowtie-align-l-debug
/usr/bin/bowtie-align-s
/usr/bin/bowtie-align-s-debug
/usr/bin/bowtie-build
/usr/bin/bowtie-build-l
/usr/bin/bowtie-build-l-debug
/usr/bin/bowtie-build-s
/usr/bin/bowtie-build-s-debug
/usr/bin/bowtie-inspect
/usr/bin/bowtie-inspect-l
/usr/bin/bowtie-inspect-l-debug
/usr/bin/bowtie-inspect-s
/usr/bin/bowtie-inspect-s-debug
/usr/lib/.build-id
/usr/lib/.build-id/0a
/usr/lib/.build-id/0a/f27b32290d23ff2301a5431e0a71f50d03d726
/usr/lib/.build-id/15
/usr/lib/.build-id/15/11996e8d8c35e039ee53699d5af9c1cddbd6a3
/usr/lib/.build-id/26
/usr/lib/.build-id/26/66830dec045ac62f927cc84e9dc594197953d0
/usr/lib/.build-id/4d
/usr/lib/.build-id/4d/97bd40a9bcdcd647d23c02eb4d2ae8ab247755
/usr/lib/.build-id/61
/usr/lib/.build-id/61/2c774b6afa3c022461e5515e010ac750176c08
/usr/lib/.build-id/87
/usr/lib/.build-id/87/7f6d44bd3fd8664cbf87faf6af454a02498789
/usr/lib/.build-id/b8
/usr/lib/.build-id/b8/568778e0890473ff26f9bf94dd0436cfd424f9
/usr/lib/.build-id/c7
/usr/lib/.build-id/c7/29cdf452ab446f2aa8e7530d60c47e2ff30823
/usr/lib/.build-id/c8
/usr/lib/.build-id/c8/494356a60af2a3478c0e7cc235543dbcc4092e
/usr/lib/.build-id/cf
/usr/lib/.build-id/cf/59fa95724d04c29aeec0f0f05b770bd0418ff2
/usr/lib/.build-id/d2
/usr/lib/.build-id/d2/2b729ddd0d3908b1275a47dfb4a1780c95fa92
/usr/lib/.build-id/df
/usr/lib/.build-id/df/c69f3c16e312bf0c7cb34eed6f0de85be42439
/usr/share/bowtie
/usr/share/bowtie/genomes
/usr/share/bowtie/genomes/NC_008253.fna
/usr/share/bowtie/indexes
/usr/share/bowtie/indexes/e_coli.1.ebwt
/usr/share/bowtie/indexes/e_coli.2.ebwt
/usr/share/bowtie/indexes/e_coli.3.ebwt
/usr/share/bowtie/indexes/e_coli.4.ebwt
/usr/share/bowtie/indexes/e_coli.README
/usr/share/bowtie/indexes/e_coli.rev.1.ebwt
/usr/share/bowtie/indexes/e_coli.rev.2.ebwt
/usr/share/bowtie/reads
/usr/share/bowtie/reads/e_coli_1000.fa
/usr/share/bowtie/reads/e_coli_1000.fq
/usr/share/bowtie/reads/e_coli_1000.raw
/usr/share/bowtie/reads/e_coli_10000snp.fa
/usr/share/bowtie/reads/e_coli_10000snp.fq
/usr/share/bowtie/reads/e_coli_1000_1.fa
/usr/share/bowtie/reads/e_coli_1000_1.fq
/usr/share/bowtie/reads/e_coli_1000_2.fa
/usr/share/bowtie/reads/e_coli_1000_2.fq
/usr/share/bowtie/reads/e_coli_1000_interleaved.fq
/usr/share/bowtie/scripts
/usr/share/bowtie/scripts/best_verify.pl
/usr/share/bowtie/scripts/bowtie-hbb.sh
/usr/share/bowtie/scripts/bs_mapability.pl
/usr/share/bowtie/scripts/build_test.sh
/usr/share/bowtie/scripts/colorize_fasta.pl
/usr/share/bowtie/scripts/colorize_fastq.pl
/usr/share/bowtie/scripts/convert_quals.pl
/usr/share/bowtie/scripts/fastq_to_tabbed.pl
/usr/share/bowtie/scripts/gen_2b_occ_lookup.pl
/usr/share/bowtie/scripts/gen_dnamasks2colormask.pl
/usr/share/bowtie/scripts/gen_occ_lookup.pl
/usr/share/bowtie/scripts/gen_solqual_lookup.pl
/usr/share/bowtie/scripts/infer_fraglen.pl
/usr/share/bowtie/scripts/make_a_thaliana_tair.sh
/usr/share/bowtie/scripts/make_b_taurus_UMD3.sh
/usr/share/bowtie/scripts/make_c_elegans.sh
/usr/share/bowtie/scripts/make_canFam2.sh
/usr/share/bowtie/scripts/make_d_melanogaster.sh
/usr/share/bowtie/scripts/make_e_coli.sh
/usr/share/bowtie/scripts/make_galGal3.sh
/usr/share/bowtie/scripts/make_h_sapiens_ncbi36.sh
/usr/share/bowtie/scripts/make_h_sapiens_ncbi37.sh
/usr/share/bowtie/scripts/make_hg18.sh
/usr/share/bowtie/scripts/make_hg19.sh
/usr/share/bowtie/scripts/make_m_musculus_ncbi37.sh
/usr/share/bowtie/scripts/make_mm8.sh
/usr/share/bowtie/scripts/make_mm9.sh
/usr/share/bowtie/scripts/make_rn4.sh
/usr/share/bowtie/scripts/make_s_cerevisiae.sh
/usr/share/bowtie/scripts/mapability.pl
/usr/share/bowtie/scripts/pe_verify.pl
/usr/share/bowtie/scripts/reconcile_alignments.pl
/usr/share/bowtie/scripts/reconcile_alignments_pe.pl
/usr/share/bowtie/scripts/run-hbb.sh
/usr/share/doc/bowtie
/usr/share/doc/bowtie/AUTHORS
/usr/share/doc/bowtie/MANUAL
/usr/share/doc/bowtie/NEWS
/usr/share/doc/bowtie/TUTORIAL
/usr/share/doc/bowtie/VERSION
/usr/share/doc/bowtie/manual.html
/usr/share/doc/bowtie/style.css
/usr/share/licenses/bowtie
/usr/share/licenses/bowtie/LICENSE

Generated by rpm2html 1.8.1

Fabrice Bellet, Thu May 9 19:58:19 2024