fastx_toolkit-0.0.14-32.fc39 RPM for s390x

From Fedora 39 for s390x / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(s390-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• glibc >= 2.37.9000-17
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.2)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPLv3+

Changelog

* Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-32
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-31
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-29
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-28
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/0a
/usr/lib/.build-id/0a/81b23ea911e8c5b021edb4d2645f51f32f9139
/usr/lib/.build-id/0d
/usr/lib/.build-id/0d/f4e2dea82ebb40704772c048da1d24038b968d
/usr/lib/.build-id/1d
/usr/lib/.build-id/1d/95d1bbc432b12eca821ffd74e78b1be8ed53a0
/usr/lib/.build-id/1f
/usr/lib/.build-id/1f/a6ddb698aa4a1fec4baded21120fe8c54b0805
/usr/lib/.build-id/22
/usr/lib/.build-id/22/db0acace7e9f46e3a44d7f6f29e31fabcb11f7
/usr/lib/.build-id/2e
/usr/lib/.build-id/2e/6290909e73a3148b980cab071bf3ffca9213b1
/usr/lib/.build-id/4c
/usr/lib/.build-id/4c/737ce34625c77799188ee8d954ed6ea4e2f40f
/usr/lib/.build-id/4e
/usr/lib/.build-id/4e/27bce3e6ac750c4a82965196179723dfa15253
/usr/lib/.build-id/70
/usr/lib/.build-id/70/1cfe0436a4c0b8c09cf464bdc30b93440092e6
/usr/lib/.build-id/8e
/usr/lib/.build-id/8e/49a96aacaedd7ca5f943f986a335f788395c8e
/usr/lib/.build-id/a8
/usr/lib/.build-id/a8/537e00f92306000d8b911597a61bf7993fb8a1
/usr/lib/.build-id/a8/9f59d385abc2413681fafe84219c224e24c5b6
/usr/lib/.build-id/a9
/usr/lib/.build-id/a9/81b5bbaf5a0063307cc00974ead7c44985709c
/usr/lib/.build-id/d1
/usr/lib/.build-id/d1/2408f7d919e341e4dffe4c48186b2bb3c10fa1
/usr/lib/.build-id/ec
/usr/lib/.build-id/ec/0bab979aea945fb293de825f9e61a680e5fa3a
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Fri May 10 02:45:49 2024