fastx_toolkit-0.0.14-32.fc39 RPM for ppc64le

From Fedora 39 for ppc64le / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(ppc-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• glibc >= 2.37.9000-17
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.17)(64bit)
• libc.so.6(GLIBC_2.32)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPLv3+

Changelog

* Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-32
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-31
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-29
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-28
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/03
/usr/lib/.build-id/03/25c57eed612bd2be41baeba11c1eaa287d1bc4
/usr/lib/.build-id/05
/usr/lib/.build-id/05/3b0c0a094f2bef1236ca859781aa3cd8021cfa
/usr/lib/.build-id/3e
/usr/lib/.build-id/3e/7c76ab26f6a6bac0d34c765873c4354267b73a
/usr/lib/.build-id/44
/usr/lib/.build-id/44/8f2c874dfbed5ef6768eaf82e88f8345f52e88
/usr/lib/.build-id/4c
/usr/lib/.build-id/4c/db034ad69d5b2cad15b888ec9b3d9f03f358a1
/usr/lib/.build-id/50
/usr/lib/.build-id/50/8073a320b16b74ffc838c7fca305f7d3fb33e4
/usr/lib/.build-id/5d
/usr/lib/.build-id/5d/3649696996ec399c4cddc229c66ca855069f3a
/usr/lib/.build-id/97
/usr/lib/.build-id/97/97ae80217f3ce70b00ace23053a06a77b4354a
/usr/lib/.build-id/ad
/usr/lib/.build-id/ad/7668d48bcd1f1f5e55137944c2e379de586931
/usr/lib/.build-id/ae
/usr/lib/.build-id/ae/3dc2bbb0af5d0276967812ca55fa4b12f87bf6
/usr/lib/.build-id/ce
/usr/lib/.build-id/ce/19fdf075b72e24b8836d5da6930edd53672d94
/usr/lib/.build-id/e2
/usr/lib/.build-id/e2/7c45329731bb3f3664a95f525f0f10fa800415
/usr/lib/.build-id/f5
/usr/lib/.build-id/f5/a06313802c75cda658c02b047c269c74bd165e
/usr/lib/.build-id/fe
/usr/lib/.build-id/fe/8a3df3e2024e6c8b564d15c6392dfa87ad24e2
/usr/lib/.build-id/ff
/usr/lib/.build-id/ff/421de9e040037caccfcd50a561fe0821c64f00
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Fri May 10 02:35:47 2024