glimmer-3.02b-22.fc37 RPM for x86_64

From Fedora 37 for x86_64 / g

Glimmer is a system for finding genes in microbial DNA, especially the genomes
of bacteria, archaea, and viruses. Glimmer (Gene Locator and Interpolated
Markov ModelER) uses interpolated Markov models (IMMs) to identify the coding
regions and distinguish them from noncoding DNA.

Provides

• glimmer
• glimmer(x86-64)

Requires

• /usr/bin/awk
• /usr/bin/csh
• elph
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.14)(64bit)
• libc.so.6(GLIBC_2.2.5)(64bit)
• libc.so.6(GLIBC_2.3.4)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libc.so.6(GLIBC_2.7)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.2.5)(64bit)
• libm.so.6(GLIBC_2.27)(64bit)
• libm.so.6(GLIBC_2.29)(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.8)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)

License

Artistic clarified

Changelog

* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-22
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-21
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Thu Jul 22 2021 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-20
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-19
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Sat Aug 01 2020 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-18
  - Second attempt - Rebuilt for
    https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Tue Jul 28 2020 Jeff Law <law@redhat.com> - 3.02b-17
  - Force C++14 as this code is not C++17 ready
* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-16
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

Files

/usr/bin/g3-from-scratch.csh
/usr/bin/g3-from-training.csh
/usr/bin/g3-iterated.csh
/usr/bin/glimmer3
/usr/lib/.build-id
/usr/lib/.build-id/08
/usr/lib/.build-id/08/171d18963f017930c8bd4c6cff5a98f4f7be8f
/usr/lib/.build-id/18
/usr/lib/.build-id/18/b828b210fc40217771e63c9c21874fdd07e3f2
/usr/lib/.build-id/2d
/usr/lib/.build-id/2d/b9ceb7ccca944e10c21d46e61f5ba48e698fdc
/usr/lib/.build-id/2e
/usr/lib/.build-id/2e/432b74a6b6a005720bc7705ea2b581b63313ec
/usr/lib/.build-id/4a
/usr/lib/.build-id/4a/1f32f68536b803d0be92efb658aa17126baeb6
/usr/lib/.build-id/7e
/usr/lib/.build-id/7e/97d7c92a27706478fcfd5c4db057b59d11f009
/usr/lib/.build-id/98
/usr/lib/.build-id/98/16ac3fdc0fbfc83e7036492580a17e80a22868
/usr/lib/.build-id/c6
/usr/lib/.build-id/c6/cf77d777c17066c609afffb6a2befb657af03d
/usr/lib/.build-id/e5
/usr/lib/.build-id/e5/939994d17aefa7eb1381221d195cfa39dab05c
/usr/lib/.build-id/eb
/usr/lib/.build-id/eb/c18f254eaad6e315a2eb6503096599028bf88a
/usr/lib/.build-id/ed
/usr/lib/.build-id/ed/9efffda0da03b9f1b6bc13283ae8555f22ae13
/usr/lib/.build-id/ef
/usr/lib/.build-id/ef/c48fb8ed44b9e22d2c45a53853cad520bdfa39
/usr/lib/.build-id/f4
/usr/lib/.build-id/f4/eef7f947ae7b60ccd051add3cf27665ee2a9c0
/usr/libexec/glimmer3
/usr/libexec/glimmer3/anomaly
/usr/libexec/glimmer3/build-fixed
/usr/libexec/glimmer3/build-icm
/usr/libexec/glimmer3/entropy-profile
/usr/libexec/glimmer3/entropy-score
/usr/libexec/glimmer3/extract
/usr/libexec/glimmer3/glimmer3
/usr/libexec/glimmer3/long-orfs
/usr/libexec/glimmer3/multi-extract
/usr/libexec/glimmer3/score-fixed
/usr/libexec/glimmer3/start-codon-distrib
/usr/libexec/glimmer3/uncovered
/usr/libexec/glimmer3/window-acgt
/usr/share/doc/glimmer
/usr/share/doc/glimmer/LICENSE
/usr/share/doc/glimmer/glim302notes.pdf
/usr/share/doc/glimmer/sample-run
/usr/share/doc/glimmer/sample-run/from-scratch.detail
/usr/share/doc/glimmer/sample-run/from-scratch.icm
/usr/share/doc/glimmer/sample-run/from-scratch.longorfs
/usr/share/doc/glimmer/sample-run/from-scratch.predict
/usr/share/doc/glimmer/sample-run/from-scratch.train
/usr/share/doc/glimmer/sample-run/from-training.detail
/usr/share/doc/glimmer/sample-run/from-training.icm
/usr/share/doc/glimmer/sample-run/from-training.motif
/usr/share/doc/glimmer/sample-run/from-training.predict
/usr/share/doc/glimmer/sample-run/from-training.train
/usr/share/doc/glimmer/sample-run/from-training.upstream
/usr/share/doc/glimmer/sample-run/iterated.coords
/usr/share/doc/glimmer/sample-run/iterated.detail
/usr/share/doc/glimmer/sample-run/iterated.icm
/usr/share/doc/glimmer/sample-run/iterated.longorfs
/usr/share/doc/glimmer/sample-run/iterated.motif
/usr/share/doc/glimmer/sample-run/iterated.predict
/usr/share/doc/glimmer/sample-run/iterated.run1.detail
/usr/share/doc/glimmer/sample-run/iterated.run1.predict
/usr/share/doc/glimmer/sample-run/iterated.train
/usr/share/doc/glimmer/sample-run/iterated.upstream
/usr/share/doc/glimmer/sample-run/tpall.fna
/usr/share/doc/glimmer/sample-run/tpall.nh
/usr/share/glimmer3
/usr/share/glimmer3/get-motif-counts.awk
/usr/share/glimmer3/glim-diff.awk
/usr/share/glimmer3/match-list-col.awk
/usr/share/glimmer3/not-acgt.awk
/usr/share/glimmer3/upstream-coords.awk

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Fabrice Bellet, Tue Apr 9 20:33:48 2024