fastx_toolkit-0.0.14-30.fc37 RPM for aarch64

From Fedora 37 for aarch64 / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(aarch-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• ld-linux-aarch64.so.1()(64bit)
• ld-linux-aarch64.so.1(GLIBC_2.17)(64bit)
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.17)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPLv3+

Changelog

* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-29
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-28
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-27
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Wed Aug 26 2020 Jeff Law <law@redhat.com> - 0.0.14-26
  - No longer force C++11 mode
* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-25
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/22
/usr/lib/.build-id/22/d371ceef8fc105f564038e1b562e3d06f8e6f3
/usr/lib/.build-id/31
/usr/lib/.build-id/31/3f857ee03e0f5222dbe0a66d046bf17ded6588
/usr/lib/.build-id/64
/usr/lib/.build-id/64/90a1c86dde29345ec6c310affcc9367baf9a6c
/usr/lib/.build-id/65
/usr/lib/.build-id/65/b08cc3b1d16777a297752050db8fa087035f4a
/usr/lib/.build-id/66
/usr/lib/.build-id/66/3c98211d987ae68358ee82298de2dee3beb93e
/usr/lib/.build-id/78
/usr/lib/.build-id/78/424f4dd1e3a812ccead1165e1aa9c07eeeb86b
/usr/lib/.build-id/95
/usr/lib/.build-id/95/3da690086746b0e64b05cf3ed512d6288ffb1a
/usr/lib/.build-id/95/f545a59b63bb3d0f8a8ad789b2b22fb9932fee
/usr/lib/.build-id/98
/usr/lib/.build-id/98/adfe362111b1db6119c83253669198c8398254
/usr/lib/.build-id/9c
/usr/lib/.build-id/9c/bb0426086001d709b980df4570a04eb46e3136
/usr/lib/.build-id/bb
/usr/lib/.build-id/bb/33e33723f6b9c057be374b30812058cae09dc6
/usr/lib/.build-id/c9
/usr/lib/.build-id/c9/7a846d083c4c1704dfa6feff4731073c790286
/usr/lib/.build-id/e4
/usr/lib/.build-id/e4/e6e06e1039d45778c28e682036628bf909263c
/usr/lib/.build-id/e8
/usr/lib/.build-id/e8/61277e0b8d60addf2f707f5dc58a42833715c5
/usr/lib/.build-id/ec
/usr/lib/.build-id/ec/6dfe1190a2ef8471b07ceffbd55ec3a1c7c1a1
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Thu May 9 20:22:59 2024